Showing results 21 to 40 of 42
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Issue Date | Title | Author(s) |
2016 | The Gearbox of the bacterial flagellar motor switch | Pandini, A; Morcos, F; Khan, S |
2013 | GSATools: Analysis of allosteric communication and functional local motions using a structural alphabet | Pandini, A; Fornili, A; Fraternali, F; Kleinjung, J |
2017 | In silico identification of rescue sites by double force scanning | Tiberti, M; Pandini, A; Fraternali, F; Fornili, A |
2017 | Ligand-induced perturbation of the HIF-2α:ARNT dimer dynamics | Minici, C; Corrada, D; Bonati, L; Pandini, A |
12-Apr-2021 | Machine Learning Prediction of Allosteric Drug Activity from Molecular Dynamics | Marchetti, F; Moroni, E; Pandini, A; Colombo, G |
7-Jul-2023 | MDSubSampler: a posteriori sampling of important protein conformations from biomolecular simulations | Oues, N; Dantu, SC; Patel, RJ; Pandini, A |
2022 | Methodology for identifying alternative solutions in a population based data generation approach applied to synthetic biology | Jayaweera, Yasoda |
20-Apr-2024 | N4BP1 functions as a dimerization-dependent linear ubiquitin reader which regulates TNF signalling | Kliza, KW; Song, W; Pinzuti, I; Schaubeck, S; Kunzelmann, S; Kuntin, D; Fornili, A; Pandini, A; Hofmann, K; Garnett, JA; Stieglitz, B; Husnjak, K |
2-Nov-2021 | N4BP1 is dimerization-dependent linear ubiquitin reader regulating TNFR1 signalling through linear ubiquitin binding and Caspase-8-mediated processing | Kliza, K; Song, W; Pinzuti, I; Schaubeck, S; Kunzelmann, S; Kuntin, D; Fornili, A; Pandini, A; Hofmann, K; Garnett, JA; Stieglitz, B; Husnjak, K |
25-Feb-2022 | PathDetect-SOM: A Neural Network Approach for the Identification of Pathways in Ligand Binding Simulations | Motta, S; Callea, L; Bonati, L; Pandini, A |
2015 | The phylogenetic signature underlying ATP synthase c-ring compliance | Pandini, A; Kleinjung, J; Taylor, WR; Junge, W; Khan, S |
2011 | Predicting the accuracy of protein-ligand docking on homology models | Bordogna, A; Pandini, A; Bonati, L |
26-Mar-2024 | PyCoM: a python library for large-scale analysis of residue-residue coevolution data | Bibik, P; Alibai, S; Pandini, A; Dantu, SC |
1-Aug-2022 | Recognizing the Binding Pattern and Dissociation Pathways of the p300 Taz2-p53 TAD2 Complex | Li, T; Motta, S; Stevens, AO; Song, S; Hendrix, E; Pandini, A; He, Y |
20-Mar-2021 | Reconstruction of ARNT PAS-B Unfolding Pathways by Steered Molecular Dynamics and Artificial Neural Networks | Motta, S; Pandini, A; Fornili, A; Bonati, L |
2013 | Specialized dynamical properties of promiscuous residues revealed by simulated conformational ensembles | Fornili, A; Pandini, A; Lu, H-C; Fraternali, F |
2010 | Structural alphabets derived from attractors in conformational space | Pandini, A; Fornili, A; Kleinjung, J |
2007 | Structural and functional characterization of the aryl hydrocarbon receptor ligand binding domain by homology modeling and mutational analysis | Pandini, A; Denison, MS; Song, Y; Soshilov, AA; Bonati, L |
9-Apr-2021 | Structural dynamics of the β-coronavirus M<sup>pro</sup> protease ligand binding sites | Cho, E; Rosa, M; Anjum, R; Mehmood, S; Soban, M; Mujtaba, M; Bux, K; Dantu, S; Pandini, A; Yin, J; Ma, H; Ramanathan, A; Islam, B; Mey, ASJS; Bhowmik, D; Haider, S |
11-Jun-2020 | Structure, Dynamics and Cellular Insight Into Novel Substrates of the Legionella pneumophila Type II Secretion System | Portlock, TJ; Tyson, JY; Dantu, SC; Rehman, S; White, RC; McIntire, IE; Sewell, L; Richardson, K; Shaw, R; Pandini, A; Cianciotto, NP; Garnett, JA |