Please use this identifier to cite or link to this item:
http://bura.brunel.ac.uk/handle/2438/9136
Full metadata record
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Oehm, S | - |
dc.contributor.author | Gilbert, D | - |
dc.contributor.author | Tauch, A | - |
dc.contributor.author | Stoye, J | - |
dc.contributor.author | Goesmann, A | - |
dc.date.accessioned | 2014-09-23T15:49:55Z | - |
dc.date.available | 2014-09-23T15:49:55Z | - |
dc.date.issued | 2008 | - |
dc.identifier.citation | Nucleic Acids Research, 36(S2), W433 - W437, 2008 | en_US |
dc.identifier.issn | 0305-1048 | - |
dc.identifier.uri | http://nar.oxfordjournals.org/content/36/suppl_2/W433 | en |
dc.identifier.uri | http://bura.brunel.ac.uk/handle/2438/9136 | - |
dc.description | Copyright @ 2008 The Authors. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/ by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. | en_US |
dc.description.abstract | In order to understand the phenotype of any living system, it is essential to not only investigate its genes, but also the specific metabolic pathway variant of the organism of interest, ideally in comparison with other organisms. The Comparative Pathway Analyzer, CPA, calculates and displays the differences in metabolic reaction content between two sets of organisms. Because results are highly dependent on the distribution of organisms into these two sets and the appropriate definition of these sets often is not easy, we provide hierarchical clustering methods for the identification of significant groupings. CPA also visualizes the reaction content of several organisms simultaneously allowing easy comparison. Reaction annotation data and maps for visualizing the results are taken from the KEGG database. Additionally, users can upload their own annotation data. This website is free and open to all users and there is no login requirement. It is available at https://www.cebitec.uni-bielefeld.de/groups/brf/software/cpa/index.html. | en_US |
dc.description.sponsorship | Bundesministerium fur Bildung und Forschung, Deutsche Forschungsgemeinschaft, International Graduate School in Bioinformatics and Genome Research, and University of Glasgow. | en_US |
dc.language | English | - |
dc.language.iso | en | en_US |
dc.publisher | Oxford University Press | en_US |
dc.subject | Phenotype | en_US |
dc.subject | Metabolic pathway | en_US |
dc.subject | Comparative Pathway Analyzer | en_US |
dc.subject | Multiple organisms | en_US |
dc.subject | Metabolic networks | en_US |
dc.title | Comparative Pathway Analyzer - A web server for comparative analysis, clustering and visualization of metabolic networks in multiple organisms | en_US |
dc.type | Article | en_US |
dc.identifier.doi | http://dx.doi.org/10.1093/nar/gkn284 | - |
pubs.organisational-data | /Brunel | - |
pubs.organisational-data | /Brunel/Brunel Staff by College/Department/Division | - |
pubs.organisational-data | /Brunel/Brunel Staff by College/Department/Division/College of Engineering, Design and Physical Sciences | - |
pubs.organisational-data | /Brunel/Brunel Staff by College/Department/Division/College of Engineering, Design and Physical Sciences/Dept of Computer Science | - |
pubs.organisational-data | /Brunel/Brunel Staff by College/Department/Division/College of Engineering, Design and Physical Sciences/Dept of Computer Science/Computer Science | - |
pubs.organisational-data | /Brunel/Brunel Staff by Institute/Theme | - |
pubs.organisational-data | /Brunel/Brunel Staff by Institute/Theme/Institute of Environmental, Health and Societies | - |
pubs.organisational-data | /Brunel/Brunel Staff by Institute/Theme/Institute of Environmental, Health and Societies/Synthetic Biology | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/Brunel Business School - URCs and Groups | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/Brunel Business School - URCs and Groups/Centre for Research into Entrepreneurship, International Business and Innovation in Emerging Markets | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Health Sciences and Social Care - URCs and Groups | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Health Sciences and Social Care - URCs and Groups/Brunel Institute for Ageing Studies | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Health Sciences and Social Care - URCs and Groups/Brunel Institute of Cancer Genetics and Pharmacogenomics | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Health Sciences and Social Care - URCs and Groups/Centre for Systems and Synthetic Biology | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Information Systems, Computing and Mathematics - URCs and Groups | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Information Systems, Computing and Mathematics - URCs and Groups/Multidisclipary Assessment of Technology Centre for Healthcare (MATCH) | - |
Appears in Collections: | Computer Science Dept of Computer Science Research Papers |
Files in This Item:
File | Description | Size | Format | |
---|---|---|---|---|
Fulltext.pdf | 3.34 MB | Adobe PDF | View/Open |
Items in BURA are protected by copyright, with all rights reserved, unless otherwise indicated.