Please use this identifier to cite or link to this item: http://bura.brunel.ac.uk/handle/2438/28484
Title: Validated respiratory drug deposition predictions from 2D and 3D medical images with statistical shape models and convolutional neural networks
Authors: Williams, J
Ahlqvist, H
Cunningham, A
Kirby, A
Katz, I
Fleming, J
Conway, J
Cunningham, S
Ozel, A
Wolfram, U
Keywords: x-ray radiography;pulmonary imaging;computed axial tomography;inhalation;trachea;simulation and modeling;respiratory physiology;in vivo imaging
Issue Date: 26-Jan-2024
Publisher: PLOS
Citation: Williams, J. et al. (2024) ''Validated respiratory drug deposition predictions from 2D and 3D medical images with statistical shape models and convolutional neural networks, PLoS ONE, 2024, 19 (1), e0297437, pp. 1 - 32. doi: 10.1371/journal.pone.0297437.
Abstract: For the one billion sufferers of respiratory disease, managing their disease with inhalers crucially influences their quality of life. Generic treatment plans could be improved with the aid of computational models that account for patient-specific features such as breathing pattern, lung pathology and morphology. Therefore, we aim to develop and validate an automated computational framework for patient-specific deposition modelling. To that end, an image processing approach is proposed that could produce 3D patient respiratory geometries from 2D chest X-rays and 3D CT images. We evaluated the airway and lung morphology produced by our image processing framework, and assessed deposition compared to in vivo data. The 2D-to-3D image processing reproduces airway diameter to 9% median error compared to ground truth segmentations, but is sensitive to outliers of up to 33% due to lung outline noise. Predicted regional deposition gave 5% median error compared to in vivo measurements. The proposed framework is capable of providing patient-specific deposition measurements for varying treatments, to determine which treatment would best satisfy the needs imposed by each patient (such as disease and lung/airway morphology). Integration of patient-specific modelling into clinical practice as an additional decision-making tool could optimise treatment plans and lower the burden of respiratory diseases.
Description: Data Availability: The data and code underlying the results presented in the study are available from https://doi.org/10.5281/zenodo.10512507 which provides a static link to our git repository (https://github.com/jvwilliams23/respiratory2Dto3Dpaper).
Supporting information is available online at: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0297437#sec017 .
URI: http://bura.brunel.ac.uk/handle/2438/28484
DOI: http://dx.doi.org/10.1371/journal.pone.0297437
Other Identifiers: ORCiD: Josh Williams https://orcid.org/0000-0002-7525-3622
ORCiD: Andrew Kirby https://orcid.org/0000-0001-7043-0549
ORCiD: Joy Conway https://orcid.org/0000-0001-6464-1526
ORCiD: Alin Ozel https://orcid.org/0000-0002-0133-2002
e0297437
Appears in Collections:Dept of Health Sciences Research Papers

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