Brunel University Research Archive(BURA) preserves and enables easy and open access to all
types of digital content. It showcases Brunel's research outputs.
Research contained within BURA is open access, although some publications may be subject
to publisher imposed embargoes. All awarded PhD theses are also archived on BURA.
Browsing by Author Paten, B
Showing results 1 to 7 of 7
| Issue Date | Title | Author(s) |
|---|---|---|
| 8-Jan-2021 | GENCODE 2021 | Frankish, A; Diekhans, M; Jungreis, I; Lagarde, J; Loveland, JE; Mudge, JM; Sisu, C; Wright, JC; Armstrong, J; Barnes, I; Berry, A; Bignell, A; Boix, C; Carbonell Sala, S; Cunningham, F; Di Domenico, T; Donaldson, S; Fiddes, IT; García Girón, C; Gonzalez, JM; Grego, T; Hardy, M; Hourlier, T; Howe, KL; Hunt, T; Izuogu, OG; Johnson, R; Martin, FJ; Martínez, L; Mohanan, S; Muir, P; Navarro, FCP; Parker, A; Pei, B; Pozo, F; Riera, FC; Ruffier, M; Schmitt, BM; Stapleton, E; Suner, MM; Sycheva, I; Uszczynska-Ratajczak, B; Wolf, MY; Xu, J; Yang, YT; Yates, A; Zerbino, D; Zhang, Y; Choudhary, JS; Gerstein, M; Guigó, R; Hubbard, TJP; Kellis, M; Paten, B; Tress, ML; Flicek, P |
| 20-Nov-2024 | GENCODE 2025: reference gene annotation for human and mouse | Mudge, JM; Carbonell-Sala, S; Diekhans, M; Martinez, JG; Hunt, T; Jungreis, I; Loveland, JE; Arnan, C; Barnes, I; Bennett, R; Berry, A; Bignell, A; Cerdán-Vélez, D; Cochran, K; Cortés, LT; Davidson, C; Donaldson, S; Dursun, C; Fatima, R; Hardy, M; Hebbar, P; Hollis, Z; James, BT; Jiang, Y; Johnson, R; Kaur, G; Kay, M; Mangan, RJ; Maquedano, M; Gómez, LM; Mathlouthi, N; Merritt, R; Ni, P; Palumbo, E; Perteghella, T; Pozo, F; Raj, S; Sisu, C; Steed, E; Sumathipala, D; Suner, M-M; Uszczynska-Ratajczak, B; Wass, E; Yang, YT; Zhang, D; Finn, RD; Gerstein, M; Guigó, R; Hubbard, TJP; Kellis, M; Kundaje, A; Paten, B; Tress, ML; Birney, E; Martin, FJ; Frankish, A |
| 2018 | GENCODE reference annotation for the human and mouse genomes | Frankish, A; Diekhans, M; Ferreira, AM; Johnson, R; Jungreis, I; Loveland, J; Mudge, JM; Sisu, C; Wright, C; Armstrong, J; Barnes, I; Berry, A; Bignell, A; Carbonell Sala, S; Chrast, J; Cunningham, F; Di Domenico, T; Donaldson, S; Fiddes, IT; García Girón, C; Gonzalez, JM; Grego, T; Hardy, M; Hourlier, T; Hunt, T; Izuogu, OG; Lagarde, J; Martin, FJ; Martínez, L; Mohanan, S; Muir, P; Navarro, FCP; Parker, A; Pei, B; Pozo, F; Ruffier, M; Schmitt, BM; Stapleton, E; Suner, MM; Sycheva, I; Uszczynska-Ratajczak, B; Xu, J; Yates, A; Zebrino, D; Zhang, Y; Aken, B; Choudhary, JS; Gerstein, MB; Guigó, R; Hubbard, TJP; Kellis, M; Paten, B; Reymond, A; Tress, ML; Flicek, P |
| 31-Oct-2024 | GENCODE: massively expanding the lncRNA catalog through capture long-read RNA sequencing | Kaur, G; Perteghella, T; Carbonell-Sala, S; Gonzalez-Martinez, J; Hunt, T; Mądry, T; Jungreis, I; Arnan, C; Lagarde, J; Borsari, B; Sisu, C; Jiang, Y; Bennett, R; Berry, A; Cerdán-Vélez, D; Cochran, K; Vara, C; Davidson, C; Donaldson, S; Dursun, C; González-López, S; Gopal Das, S; Hardy, M; Hollis, Z; Kay, M; Montañés, JC; Ni, P; Nurtdinov, R; Palumbo, E; Pulido-Quetglas, C; Suner, M-M; Yu, X; Zhang, D; Loveland, JE; Albà, MM; Diekhans, M; Tanzer, A; Mudge, JM; Flicek, P; Martin, FJ; Gerstein, M; Kellis, M; Kundaje, A; Paten, B; Tress, ML; Johnson, R; Uszczynska-Ratajczak, B; Frankish, A; Guigó, R |
| 24-Nov-2022 | GENCODE: reference annotation for the human and mouse genomes in 2023 | Frankish, A; Carbonell-Sala, S; Diekhans, M; Jungreis, I; Loveland, JE; Mudge, JM; Sisu, C; Wright, JC; Arnan, C; Barnes, I; Banerjee, A; Bennett, R; Berry, A; Bignell, A; Boix, C; Calvet, F; Cerdán-Vélez, D; Cunningham, F; Davidson, C; Donaldson, S; Dursun, C; Fatima, R; Giorgetti, S; Giron, CG; Gonzalez, JM; Hardy, M; Harrison, PW; Hourlier, T; Hollis, Z; Hunt, T; James, B; Jiang, Y; Johnson, R; Kay, M; Lagarde, J; Martin, FJ; Gómez, LM; Nair, S; Ni, P; Pozo, F; Ramalingam, V; Ruffier, M; Schmitt, BM; Schreiber, JM; Steed, E; Suner, M-M; Sumathipala, D; Sycheva, I; Uszczynska-Ratajczak, B; Wass, E; Yang, YT; Yates, A; Zafrulla, Z; Choudhary, JS; Gerstein, M; Guigo, R; Hubbard, TJP; Kellis, M; Kundaje, A; Paten, B; Tress, ML; Flicek, P |
| 2018 | Repeat associated mechanisms of genome evolution and function revealed by theMus caroliandMus paharigenomes. | Roller, M; Navarro, FCP; Fiddes, I; Streeter, I; Feig, C; Martin-Galvez, D; Kolmogorov, M; Janoušek, V; Akanni, W; Aken, B; Aldridge, S; Chakrapani, V; Chow, W; Clarke, L; Cummins, C; Doran, A; Dunn, M; Goodstadt, L; Howe, K; Howell, M; Josselin, A-A; Karn, RC; Laukaitis, CM; Jingtao, L; Martin, F; Muffato, M; Nachtweide, S; Quail, MA; Sisu, C; Stanke, M; Stefflova, K; Van Oosterhout, C; Veyrunes, F; Ward, B; Yang, F; Yazdanifar, G; Zadissa, A; Adams, DJ; Brazma, A; Gerstein, M; Paten, B; Pham, S; Keane, TM; Odom, DT; Flicek, P |
| 2018 | Sixteen diverse laboratory mouse reference genomes define strain specific haplotypes and novel functional loci | Lilue, J; Doran, AG; Fiddes, IT; Abrudan, M; Armstrong, J; Bennett, R; Chow, W; Collins, J; Collins, S; Czechanski, A; Danecek, P; Diekhans, M; Dolle, D-D; Dunn, M; Durbin, R; Earl, D; Ferguson-Smith, A; Flicek, P; Flint, J; Frankish, A; Fu, B; Gerstein, M; Gilbert, J; Goodstadt, L; Harrow, J; Howe, K; Ibarra-Soria, X; Kolmogorov, M; Lelliott, C; Logan, DW; Loveland, J; Mathews, CE; Mott, R; Muir, P; Nachtweide, S; Navarro, FCP; Odom, DT; Park, N; Pelan, S; Pham, SK; Quail, M; Reinholdt, L; Romoth, L; Shirley, L; Sisu, C; Sjoberg-Herrera, M; Stanke, M; Steward, C; Thomas, M; Threadgold, G; Thybert, D; Torrance, J; Wong, K; Wood, J; Yalcin, B; Yang, F; Adams, DJ; Paten, B; Keane, TM |