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Browsing by Author Sisu, C
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| Issue Date | Title | Author(s) |
|---|---|---|
| 26-Apr-2022 | Author Correction: Perspectives on ENCODE (Nature, (2020), 583, 7818, (693-698), 10.1038/s41586-020-2449-8) | Abascal, FBC; Acosta, R; Addleman, NJ; Adrian, J; Afzal, V; Aken, B; Ai, R; Akiyama, JA; Jammal, OA; Amrhein, H; Anderson, SM; Dileep, V; Ding, B; Djebali, S; Dobin, A; Dominguez, D; Donaldson, S; Drenkow, J; Dreszer, TR; Snyder, MP; Drier, Y; Duff, MO; Dunn, D; Sisu, C; Eastman, C; Ecker, JR; Edwards, MD; El-Ali, N; Snyder, MP; Andrews, GR; Antoshechkin, I; Ardlie, KG; Armstrong, J; Astley, M; Banerjee, B; Barkal, AA; Barnes, IHA; Barozzi, I; Barrell, D; Barson, G; Bates, D; Baymuradov, UK; Bazile, C; Beer, MA; Beik, S; Bender, MA; Bennett, R; Bouvrette, LPB; Bernstein, BE; Berry, A; Bhaskar, A; Bignell, A; Blue, SM; Bodine, DM; Boix, C; Boley, N; Borrman, T; Borsari, B; Boyle, AP; Brandsmeier, LA; Breschi, A; Bresnick, EH; Brooks, JA; Buckley, M; Burge, CB; Byron, R; Cahill, E; Cai, L; Cao, L; Carty, M; Castanon, RG; Castillo, A; Chaib, H; Chan, ET; Chee, DR; Chee, S; Chen, H; Chen, H; Chen, JY; Chen, S; Cherry, JM; Chhetri, SB; Choudhary, JS; Chrast, J; Chung, D; Clarke, D; Cody, NAL; Coppola, CJ; Coursen, J; D’Ippolito, AM; Dalton, S; Danyko, C; Davidson, C; Davila-Velderrain, J; Davis, CA; Dekker, J; Deran, A; DeSalvo, G; Despacio-Reyes, G; Dewey, CN; Dickel, DE; Diegel, M; Diekhans, M |
| 2014 | Comparative analysis of pseudogenes across three phyla | Sisu, C; Pei, B; Leng, J; Frankish, A; Zhang, Y; Balasubramanian, S; Harte, R; Wang, D; Rutenberg-Schoenberg, M; Clark, W; Diekhans, M; Rozowsky, J; Hubbard, T; Harrow, J; Gerstein, MB |
| 2014 | Comparative analysis of the transcriptome across distant species | Gerstein, MB; Rozowsky, J; Yan, K-K; Wang, D; Cheng, C; Brown, JB; Davis, CA; Hillier, L; Sisu, C; Li, JJ; Pei, B; Harmanci, AO; Duff, MO; Djebali, S; Alexander, RP; Alver, BH; Auerbach, R; Bell, K; Bickel, PJ; Boeck, ME; Boley, NP; Booth, BW; Cherbas, L; Cherbas, P; Di, C; Dobins, A; Drenkows, J; Ewing, B; Fang, G; Fastucas, M; Feingold, EA; Frankish, A; Gao, G; Good, PJ; Guigo, R; Hammonds, A; Harrow, J; Hoskins, RA; Howald, C; Hu, L; Huang, H; Hubbard, TJP; Huynh, C; Jhas, S; Kasper, D; Kato, M; Kaufman, TC; Kitchen, RR; Ladewig, E; Lagarde, J; Lai, E; Leng, L; Lu, Z; MacCoss, M; May, G; McWhirter, R; Merrihew, G; Miller, DM; Mortazavi, A; Murad, R; Oliver, B; Olson, S; Park, PJ; Pazin, MJ; Perrimon, N; Pervouchine, D; Reinke, V; Reymond, A; Robinson, G; Samsonova, A; Saunders, GI; Schlesingers, F; Sethi, A; Slack, FJ; Spencer, WC; Stoiber, MH; Strasbourger, P; Tanzer, A; Thompson, OA; Wan, KH; Wang, G; Wang, H; Watkins, KL; Wen, J; Wen, K; Xue, C; Yang, L; Yip, K; Zaleskis, C; Zhang, Y; Zheng, H; Brenner, SE; Graveley, BR; Ceniker, SE; Gingeras, TR; Waterston, R |
| 25-Apr-2019 | Deletions of Chromosome 7q Affect Nuclear Organization and HLXB9Gene Expression in Hematological Disorders | Federico, C; Owoka, T; Ragusa, D; Sturiale, V; Caponnetto, D; Leotta, CG; Bruno, F; Foster, HA; Rigamonti, S; Giudici, G; Cazzaniga, G; Bridger, JM; Sisu, C; Saccone, S; Tosi, M |
| 31-Oct-2018 | Differential expression of mTOR components in endometriosis and ovarian cancer: Effects of rapalogues and dual kinase inhibitors on mTORC1 and mTORC2 stoichiometry | Rogers‑Broadway, KR; Kumar, J; Sisu, C; Wander, G; Mazey, E; Jeyaneethi, J; Pados, G; Tsolakidis, D; Klonos, E; Grunt, T; Hall, M; Chatterjee, J; Karteris, E |
| 1-Feb-2022 | Differential Expression of RAD51AP1 in Ovarian Cancer: Effects of siRNA In Vitro | Filipe, A; Chudasama, D; Kerslake, R; Jeyaneethi, J; Anikin, V; Kyrou, I; Randeva, H; Sisu, C; Hall, M; Karteris, E |
| 8-Oct-2022 | Differential Regulation of Genes by the Glucogenic Hormone Asprosin in Ovarian Cancer | Kerslake, R; Sisu, C; Panfilov, S; Hall, M; Khan, N; Jeyaneethi, J; Randeva, H; Kyrou, I; Karteris, E |
| 2018 | Discovery and development of liquid biomarkers for ovarian and lung cancer | Chudasama, Dimple |
| 27-Apr-2024 | Effect of MYC and PARP Inhibitors in Ovarian Cancer Using an In Vitro Model | Morea, A; Saravi, S; Sisu, C; Hall, M; Tosi, S; Karteris, E; Storlazzi, CT |
| 18-Aug-2025 | Effects of Asprosin and Role of TLR4 as a Biomarker in Endometrial Cancer | Karkia, R; Sisu, C; Saravi, S; Kyrou, I; Randeva, HS; Chatterjee, J; Karteris, E |
| 1-Jul-2025 | Emerging roles of the cancerous inhibitor of protein phosphatase 2A (CIP2A) in ovarian cancer | Filipe, A; Saravi, S; Mustafov, D; Panfilov, S; Banger, S; Mousavikivaj, S; Braoudaki, M; Kailasam, S; Riazalhosseini, Y; Sahai, MA; Drenos, F; Sisu, C; Karteris, E |
| 3-Sep-2022 | Engineered model of t(7;12)(q36;p13) AML recapitulates patient-specific features and gene expression profiles | Ragusa, D; Cicirò, Y; Federico, C; Saccone, S; Bruno, F; Saeedi, R; Sisu, C; Pina, C; Sala, A; Tosi, S |
| 29-Jul-2020 | Expanded encyclopaedias of DNA elements in the human and mouse genomes | The ENCODE Project Consortium; Moore, J; Weng, Z; Sisu, C |
| 8-Jan-2021 | GENCODE 2021 | Frankish, A; Diekhans, M; Jungreis, I; Lagarde, J; Loveland, JE; Mudge, JM; Sisu, C; Wright, JC; Armstrong, J; Barnes, I; Berry, A; Bignell, A; Boix, C; Carbonell Sala, S; Cunningham, F; Di Domenico, T; Donaldson, S; Fiddes, IT; García Girón, C; Gonzalez, JM; Grego, T; Hardy, M; Hourlier, T; Howe, KL; Hunt, T; Izuogu, OG; Johnson, R; Martin, FJ; Martínez, L; Mohanan, S; Muir, P; Navarro, FCP; Parker, A; Pei, B; Pozo, F; Riera, FC; Ruffier, M; Schmitt, BM; Stapleton, E; Suner, MM; Sycheva, I; Uszczynska-Ratajczak, B; Wolf, MY; Xu, J; Yang, YT; Yates, A; Zerbino, D; Zhang, Y; Choudhary, JS; Gerstein, M; Guigó, R; Hubbard, TJP; Kellis, M; Paten, B; Tress, ML; Flicek, P |
| 20-Nov-2024 | GENCODE 2025: reference gene annotation for human and mouse | Mudge, JM; Carbonell-Sala, S; Diekhans, M; Martinez, JG; Hunt, T; Jungreis, I; Loveland, JE; Arnan, C; Barnes, I; Bennett, R; Berry, A; Bignell, A; Cerdán-Vélez, D; Cochran, K; Cortés, LT; Davidson, C; Donaldson, S; Dursun, C; Fatima, R; Hardy, M; Hebbar, P; Hollis, Z; James, BT; Jiang, Y; Johnson, R; Kaur, G; Kay, M; Mangan, RJ; Maquedano, M; Gómez, LM; Mathlouthi, N; Merritt, R; Ni, P; Palumbo, E; Perteghella, T; Pozo, F; Raj, S; Sisu, C; Steed, E; Sumathipala, D; Suner, M-M; Uszczynska-Ratajczak, B; Wass, E; Yang, YT; Zhang, D; Finn, RD; Gerstein, M; Guigó, R; Hubbard, TJP; Kellis, M; Kundaje, A; Paten, B; Tress, ML; Birney, E; Martin, FJ; Frankish, A |
| 2012 | The GENCODE pseudogene resource | Pei, B; Sisu, C; Frankish, A; Howald, C; Habegger, L; Mu, XJ; Harte, R; Balasubramanian, S; Tanzer, A; Diekhans, M; Reymond, A; Hubbard, TJ; Harrow, J; Gerstein, MB |
| 2018 | GENCODE reference annotation for the human and mouse genomes | Frankish, A; Diekhans, M; Ferreira, AM; Johnson, R; Jungreis, I; Loveland, J; Mudge, JM; Sisu, C; Wright, C; Armstrong, J; Barnes, I; Berry, A; Bignell, A; Carbonell Sala, S; Chrast, J; Cunningham, F; Di Domenico, T; Donaldson, S; Fiddes, IT; García Girón, C; Gonzalez, JM; Grego, T; Hardy, M; Hourlier, T; Hunt, T; Izuogu, OG; Lagarde, J; Martin, FJ; Martínez, L; Mohanan, S; Muir, P; Navarro, FCP; Parker, A; Pei, B; Pozo, F; Ruffier, M; Schmitt, BM; Stapleton, E; Suner, MM; Sycheva, I; Uszczynska-Ratajczak, B; Xu, J; Yates, A; Zebrino, D; Zhang, Y; Aken, B; Choudhary, JS; Gerstein, MB; Guigó, R; Hubbard, TJP; Kellis, M; Paten, B; Reymond, A; Tress, ML; Flicek, P |
| 31-Oct-2024 | GENCODE: massively expanding the lncRNA catalog through capture long-read RNA sequencing | Kaur, G; Perteghella, T; Carbonell-Sala, S; Gonzalez-Martinez, J; Hunt, T; Mądry, T; Jungreis, I; Arnan, C; Lagarde, J; Borsari, B; Sisu, C; Jiang, Y; Bennett, R; Berry, A; Cerdán-Vélez, D; Cochran, K; Vara, C; Davidson, C; Donaldson, S; Dursun, C; González-López, S; Gopal Das, S; Hardy, M; Hollis, Z; Kay, M; Montañés, JC; Ni, P; Nurtdinov, R; Palumbo, E; Pulido-Quetglas, C; Suner, M-M; Yu, X; Zhang, D; Loveland, JE; Albà, MM; Diekhans, M; Tanzer, A; Mudge, JM; Flicek, P; Martin, FJ; Gerstein, M; Kellis, M; Kundaje, A; Paten, B; Tress, ML; Johnson, R; Uszczynska-Ratajczak, B; Frankish, A; Guigó, R |
| 24-Nov-2022 | GENCODE: reference annotation for the human and mouse genomes in 2023 | Frankish, A; Carbonell-Sala, S; Diekhans, M; Jungreis, I; Loveland, JE; Mudge, JM; Sisu, C; Wright, JC; Arnan, C; Barnes, I; Banerjee, A; Bennett, R; Berry, A; Bignell, A; Boix, C; Calvet, F; Cerdán-Vélez, D; Cunningham, F; Davidson, C; Donaldson, S; Dursun, C; Fatima, R; Giorgetti, S; Giron, CG; Gonzalez, JM; Hardy, M; Harrison, PW; Hourlier, T; Hollis, Z; Hunt, T; James, B; Jiang, Y; Johnson, R; Kay, M; Lagarde, J; Martin, FJ; Gómez, LM; Nair, S; Ni, P; Pozo, F; Ramalingam, V; Ruffier, M; Schmitt, BM; Schreiber, JM; Steed, E; Suner, M-M; Sumathipala, D; Sycheva, I; Uszczynska-Ratajczak, B; Wass, E; Yang, YT; Yates, A; Zafrulla, Z; Choudhary, JS; Gerstein, M; Guigo, R; Hubbard, TJP; Kellis, M; Kundaje, A; Paten, B; Tress, ML; Flicek, P |
| 2025 | Genomics assessment of the impact of ionising radiation on the human brain | Ofosu-Dankwa, Justin |