Please use this identifier to cite or link to this item:
http://bura.brunel.ac.uk/handle/2438/31628
Title: | Immunometabolic signatures predict risk of progression to active tuberculosis and disease outcome |
Authors: | Duffy, FJ Weiner, J Hansen, S Tabb, DL Suliman, S Thompson, E Maertzdorf, J Shankar, S Tromp, G Parida, S Dover, D Axthelm, MK Sutherland, JS Dockrell, HM Ottenhoff, THM Scriba, TJ Picker, LJ Walzl, G Kaufmann, SHE Zak, DE Golinski, R Jacobson, M McEwen, G Black, GF Van Der Spuy, G Stanley, K Kriel, M DuPlessis, N Nene, N Loxton, AG Chegou, NN Fisher, M Mahomed, H Hughes, J Downing, K Penn-Nicholson, A Mulenga, H Abel, B Bowmaker, M Kagina, B Kwong, W Hanekom, CW Klein, MR Haks, MC F ranken, KL Geluk, A Van Meijgaarden, KE Joosten, SA Van Baarle, D Miedema, F Boom, WH Thiel, B Sadoff, J Sizemore, D Ramachandran, S Barker, L Brennan, M Weichold, F Muller, S Geiter, L Schoolnik, G Dolganov, G Van, T Mayanja-Kizza, H Joloba, M Zalwango, S Nsereko, M Okwera, B Kisingo, H Smith, S Gorak-Stolinska, P Hur, YG Lalor, M Lee, JS Crampin, AC French, N Ngwira, B Smith, AB Watkins, K Ambrose, L Simukonda, F Mvula, H Chilongo, F Saul, J Branson, K Kassa, D Abebe, A Mesele, T Tegbaru, B Howe, R Mihret, A Aseffa, A Bekele, Y Iwnetu, R Tafesse, M Yamuah, L Ota, M Hill, P Adegbola, R |
Keywords: | rhesus macaque;household contact;biomarker;transcriptomics;metabolomics;tuberculosis;inflammation;host-pathogen interaction |
Issue Date: | 22-Mar-2019 |
Publisher: | Frontiers Media |
Citation: | Duffy, F.J. et al. on behalf of the GC6-74 Consortium (2019) 'Immunometabolic signatures predict risk of progression to active tuberculosis and disease outcome', Frontiers in Immunology, 10, 527, pp 1 - 16. doi: 10.3389/fimmu.2019.00527. |
Abstract: | There remains a pressing need for biomarkers that can predict who will progress to active tuberculosis (TB) after exposure to Mycobacterium tuberculosis (MTB) bacterium. By analyzing cohorts of household contacts of TB index cases (HHCs) and a stringent non-human primate (NHP) challenge model, we evaluated whether integration of blood transcriptional profiling with serum metabolomic profiling can provide new understanding of disease processes and enable improved prediction of TB progression. Compared to either alone, the combined application of pre-existing transcriptome- and metabolome-based signatures more accurately predicted TB progression in the HHC cohorts and more accurately predicted disease severity in the NHPs. Pathway and data-driven correlation analyses of the integrated transcriptional and metabolomic datasets further identified novel immunometabolomic signatures significantly associated with TB progression in HHCs and NHPs, implicating cortisol, tryptophan, glutathione, and tRNA acylation networks. These results demonstrate the power of multi-omics analysis to provide new insights into complex disease processes. |
Description: | Data Availability:
All datasets generated for this study are included in the manuscript with the exception of the rhesus macaque metabolics data which is included as Table S6 [https://www.frontiersin.org/journals/immunology/articles/10.3389/fimmu.2019.00527/full#SM14]. Supplementary Material is available online at: https://www.frontiersin.org/articles/10.3389/fimmu.2019.00527/full#supplementary-material . |
URI: | https://bura.brunel.ac.uk/handle/2438/31628 |
DOI: | https://doi.org/10.3389/fimmu.2019.00527 |
Other Identifiers: | ORCiD: Steven Smith https://orcid.org/0000-0001-5623-7806 Article number: 527 |
Appears in Collections: | Dept of Life Sciences Research Papers |
Files in This Item:
File | Description | Size | Format | |
---|---|---|---|---|
FullText.pdf | Copyright © 2019 Duffy, Weiner, Hansen, Tabb, Suliman, Thompson, Maertzdorf, Shankar, Tromp, Parida, Dover, Axthelm, Sutherland, Dockrell, Ottenhoff, Scriba, Picker, Walzl, Kaufmann, Zak and The GC6-74 Consortium. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. | 4.35 MB | Adobe PDF | View/Open |
This item is licensed under a Creative Commons License