Please use this identifier to cite or link to this item: http://bura.brunel.ac.uk/handle/2438/23028
Title: Statistical Meta-Analysis of Risk Factors for Endometrial Cancer and Development of a Risk Prediction Model Using an Artificial Neural Network Algorithm
Authors: Hutt, S
Mihaies, D
Karteris, E
Michael, A
Payne, AM
Chatterjee, J
Keywords: endometrial cancer;risk;neural network
Issue Date: 22-Jul-2021
Publisher: MDPI
Citation: Hutt, S. et al. (2021) 'Statistical Meta-Analysis of Risk Factors for Endometrial Cancer and Development of a Risk Prediction Model Using an Artificial Neural Network Algorithm', Cancers, 13 (15), 3689, pp. 1 - 22. doi: 10.3390/cancers13153689.
Abstract: Objectives: In this study we wished to determine the rank order of risk factors for endometrial cancer and calculate a pooled risk and percentage risk for each factor using a statistical meta-analysis approach. The next step was to design a neural network computer model to predict the overall increase or decreased risk of cancer for individual patients. This would help to determine whether this prediction could be used as a tool to decide if a patient should be considered for testing and to predict diagnosis, as well as to suggest prevention measures to patients. Design: A meta-analysis of existing data was carried out to calculate relative risk, followed by design and implementation of a risk prediction computational model based on a neural network algorithm. Setting: Meta-analysis data were collated from various settings from around the world. Primary data to test the model were collected from a hospital clinic setting. Participants: Data from 40 patients notes currently suspected of having endometrial cancer and undergoing investigations and treatment were collected to test the software with their cancer diagnosis not revealed to the software developers. Main outcome measures: The forest plots allowed an overall relative risk and percentage risk to be calculated from all the risk data gathered from the studies. A neural network computational model to determine percentage risk for individual patients was developed, implemented, and evaluated. Results: The results show that the greatest percentage increased risk was due to BMI being above 25, with the risk increasing as BMI increases. A BMI of 25 or over gave an increased risk of 2.01%, a BMI of 30 or over gave an increase of 5.24%, and a BMI of 40 or over led to an increase of 6.9%. PCOS was the second highest increased risk at 4.2%. Diabetes, which is incidentally also linked to an increased BMI, gave a significant increased risk along with null parity and noncontinuous HRT of 1.54%, 1.2%, and 0.56% respectively. Decreased risk due to contraception was greatest with IUD (intrauterine device) and IUPD (intrauterine progesterone device) at −1.34% compared to −0.9% with oral. Continuous HRT at −0.75% and parity at −0.9% also decreased the risk. Using open-source patient data to test our computational model to determine risk, our results showed that the model is 98.6% accurate with an algorithm sensitivity 75% on average. Conclusions: In this study, we successfully determined the rank order of risk factors for endometrial cancer and calculated a pooled risk and risk percentage for each factor using a statistical meta-analysis approach. Then, using a computer neural network model system, we were able to model the overall increase or decreased risk of cancer and predict the cancer diagnosis for particular patients to an accuracy of over 98%. The neural network model developed in this study was shown to be a potentially useful tool in determining the percentage risk and predicting the possibility of a given patient developing endometrial cancer. As such, it could be a useful tool for clinicians to use in conjunction with other biomarkers in determining which patients warrant further preventative interventions to avert progressing to endometrial cancer. This result would allow for a reduction in the number of unnecessary invasive tests on patients. The model may also be used to suggest interventions to decrease the risk for a particular patient. The sensitivity of the model limits it at this stage due to the small percentage of positive cases in the datasets; however, since this model utilizes a neural network machine learning algorithm, it can be further improved by providing the system with more and larger datasets to allow further refinement of the neural network.
Description: Simple Summary: A robust and comprehensive meta-analysis, for the first time, identified definitely that BMI is by far the most influential risk factor in endometrial cancer. Risk factors were previously only studied individually and or in smaller meta-analysis studies which grouped some factors together. BMI was shown to be an important risk factor with other factors less so, but no rank order was established. This work also offers, for the first time, a neural network computer model to predict the overall increase or decreased risk of cancer for individual patients, which is 98.6% accurate. This prediction can be used as a tool to determine if a patient should be considered for testing and to predict diagnosis, as well as to suggest prevention measures to patients.
Data Availability Statement: The data used in the study are publicly available in the references cited within the text or are available on request from the corresponding author.
Supplementary Materials: The following are available online at https://www.mdpi.com/article/10.3390/cancers13153689/s1: File S1: R-script file .
Acknowledgments: We gratefully acknowledge the support of staff and the use of facilities at the Department of Gynecological Oncology, Royal Surrey NHS Foundation Trust Hospital, Department of Clinical and Experimental Medicine, School Biosciences and Medicine, Faculty of Health and Medical Sciences, University of Surrey, Department of Computer Science, College of Engineering, Design, and Physical Sciences, Brunel University, Department of Life Sciences, Division of Biosciences, College of Health, Medicine, and Life Sciences, Brunel University, and Department Cancer and Surgery, Imperial College London.
URI: https://bura.brunel.ac.uk/handle/2438/23028
DOI: https://doi.org/10.3390/cancers13153689
Other Identifiers: ORCiD; Emmanouil Karteris https://orcid.org/0000-0003-3231-7267
ORCiD: Annette M. Payne https://orcid.org/0000-0002-2009-0141
Article number 3689
Appears in Collections:Dept of Computer Science Research Papers
Dept of Life Sciences Research Papers

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